Experiment summary for ENCSR977MGF
doi:10.17989/ENCSR977MGF
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Caenorhabditis elegans strain ZM8745 (daf-16(mu86);daf-2(e1370) III; hpSi15 (Pges-1 GFP::daf-16a)) whole organism hermaphrodite L4 larva 54 hours post synchronization at L1 larva starved after bleaching stage genetically modified (insertion) using bombardment targeting C. elegans daf-16
- Biosample Type
- whole organisms
- Replication type
- unreplicated
- Description
- This is the ChIP-seq control of transgenic worms expressing DAF-16-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 2000
Attribution
modERN project
- Lab
- Valerie Reinke, Yale
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:DAF-16-ZM8745-L4-INPUT
- Date submitted
- July 29, 2015
- Date released
- May 10, 2016
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
---|---|---|---|---|---|
1 | 1 | Caenorhabditis elegans strain ZM8745 (daf-16(mu86);daf-2(e1370) III; hpSi15 (Pges-1 GFP::daf-16a)) hermaphrodite L4 larva 54 hours post synchronization at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans daf-16 | ENCBS975BGF | ENCGM684JAP | ENCLB319GGE |