1. Experiments
  2. ChIP-seq
  3. Drosophila melanogaster
  4. whole organism

Experiment summary for ENCSR972RZE

doi:10.17989/ENCSR972RZE

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
sens
Biosample summary
Drosophila melanogaster strain sens-GFP whole organism embryo (4-14 hours) genetically modified (insertion) using site-specific recombination targeting D. melanogaster sens
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing sens-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
External resources
Aliases
kevin-white:sens-GFP
Date submitted
October 22, 2015
Date released
July 6, 2016
Submitter comment
ENCFF333IDL, ENCFF148JSB, ENCFF231BTG, ENCFF148JSB, ENCFF231BTG were revoked because a software bug accidentally truncated the file content. The submitters will provide replacement files.

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
31Drosophila melanogaster strain sens-GFP mixed sex embryo (4-14 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster sensENCBS157RLDENCGM846TMAENCAB728YTOENCLB235SEZ
21Drosophila melanogaster strain sens-GFP mixed sex embryo (4-14 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster sensENCBS432CQWENCGM846TMAENCAB728YTOENCLB375QMD
11Drosophila melanogaster strain sens-GFP mixed sex embryo (4-14 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster sensENCBS894EAQENCGM846TMAENCAB728YTOENCLB858LSX

Files

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Replicates

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