Experiment summary for ENCSR949ZZD
Summary
- Status
- released
- Assay
- HiC (intact Hi-C)
- Biosample summary
- Homo sapiens T-helper 1 cell male adult (35 years) treated with 30 ng/mL Interleukin-12 subunit beta for 36 hours, 30 ng/mL Interleukin-12 subunit alpha for 36 hours, 1 μg/mL Interleukin-4 antibody for 36 hours
- Biosample Type
- primary cell
- Replication type
- unreplicated
- Description
- Naive CD4 Th1 Resting LP18 intact Mnase HiC
- Treatments
- 30 ng/mL Interleukin-12 subunit beta (UniProtKB:P29460) for 36 hours, 30 ng/mL Interleukin-12 subunit alpha (UniProtKB:P29459) for 36 hours, 1 μg/mL Interleukin-4 antibody for 36 hours
- Nucleic acid type
- DNA
- Library starting quantity
- 1000000cells
- Size range
- 100-400
- Fragmentation methods
- chemical (micrococcal nuclease)
- Size selection method
- SPRI beads
- Platform
- Ultima Genomics
Attribution
ENCODE4 project
- Lab
- Erez Aiden, Baylor
- Award
- UM1HG009375 (Erez Aiden, Baylor)
- Project
- ENCODE
- Aliases
- erez-aiden:naivecd4-th1-resting-intact
- Date released
- August 5, 2024
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens male adult (35 years) T-helper 1 primary cell treated with 30 ng/mL Interleukin-12 subunit beta for 36 hours, 30 ng/mL Interleukin-12 subunit alpha for 36 hours, 1 μg/mL Interleukin-4 antibody for 36 hours | ENCBS853JPU | ENCLB589PQB |
| 1 | 2 | Homo sapiens male adult (35 years) T-helper 1 primary cell treated with 30 ng/mL Interleukin-12 subunit beta for 36 hours, 30 ng/mL Interleukin-12 subunit alpha for 36 hours, 1 μg/mL Interleukin-4 antibody for 36 hours | ENCBS853JPU | ENCLB260FYN |