Experiment summary for ENCSR949COJ

doi:10.17989/ENCSR949COJ

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
ARNTL
Biosample summary
Homo sapiens SK-N-SH genetically modified (insertion) using CRISPR targeting H. sapiens ARNTL treated with 6 μM all-trans-retinoic acid for 48 hours
Biosample Type
cell line
Replication type
isogenic
Description
eGFP-ARNTL ChIP-seq on human SK-N-SH
Treatments
6 μM all-trans-retinoic acid (CHEBI:15367) for 48 hours
Nucleic acid type
DNA
Size range
450-650

Attribution

ENCODE4 project
Lab
Michael Snyder, Stanford
Award
UM1HG009442 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:SK-N-SH_RA_eGFP-ARNTL_CRISPR_ChIP
Date submitted
January 13, 2018
Date released
July 7, 2020

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
21Homo sapiens SK-N-SH cell line genetically modified (insertion) using CRISPR targeting H. sapiens ARNTL treated with 6 μM all-trans-retinoic acid for 48 hoursENCBS992OPIENCGM093MVPENCAB728YTOENCLB006GMW
11Homo sapiens SK-N-SH cell line genetically modified (insertion) using CRISPR targeting H. sapiens ARNTL treated with 6 μM all-trans-retinoic acid for 48 hoursENCBS813UGCENCGM093MVPENCAB728YTOENCLB697BCX