Experiment summary for ENCSR940VGU
doi:10.17989/ENCSR940VGU
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Target
- gmeb-2
- Biosample summary
- Caenorhabditis elegans strain YL631 (gmeb-2(tm6823)X) whole organism 550 minutes post synchronization using egg bleaching genetically modified (mutagenesis) using mutagen treatment targeting C. elegans gmeb-2
- Biosample Type
- whole organisms
- Replication type
- unreplicated
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- 350-600
- Extraction method
- Trizol
- Fragmentation methods
- shearing (Covaris generic)
- Strand specificity
- unstranded
- Platform
- Illumina NextSeq 500
Attribution
modERN project
- Lab
- Robert Waterston, UW
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- Aliases
- robert-waterston:experiment_tm6823_550_1
- Date submitted
- February 6, 2018
- Date released
- March 22, 2019
- Organism Development Series
- ENCSR460SCK
- Submitter comment
- Analysis of this data is in progress
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Caenorhabditis elegans strain YL631 (gmeb-2(tm6823)X) 550 minutes post synchronization using egg bleaching whole organism genetically modified (mutagenesis) using mutagen treatment targeting C. elegans gmeb-2 | ENCBS176VWB | ENCGM527GVP | ENCLB206OWP |