Experiment summary for ENCSR939PJG
doi:10.17989/ENCSR939PJG
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Caenorhabditis elegans strain OP443 whole organism hermaphrodite late embryo 4 hours post synchronization using egg bleaching genetically modified (insertion) using bombardment targeting C. elegans eyg-1
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- This is the ChIP-seq control of transgenic worms expressing Y53C12C.1-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 2000, Illumina HiSeq 2500
Attribution
modERN project
- Lab
- Valerie Reinke, Yale
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:Y53C12C.1-OP443-LE-INPUT
- Date submitted
- May 9, 2016
- Date released
- September 29, 2016
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Caenorhabditis elegans strain OP443 hermaphrodite late embryo 4 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting C. elegans eyg-1 | ENCBS855KJG | ENCGM878NBX | ENCLB039EDF |
| 2 | 1 | Caenorhabditis elegans strain OP443 hermaphrodite late embryo 4 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting C. elegans eyg-1 | ENCBS507XVO | ENCGM878NBX | ENCLB861MSP |