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  4. GM12878

Experiment summary for ENCSR936XTK

doi:10.17989/ENCSR936XTK

Summary

Status
revoked
Assay
ChIP-seq (TF ChIP-seq)
Target
ZNF143
Biosample summary
Homo sapiens GM12878
Biosample Type
cell line
Replication type
isogenic
Description
ZNF143 ChIP-seq on human GM12878
Nucleic acid type
DNA
Size range
450-650
Controls

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:ChIPss-12
Date submitted
December 17, 2014
Date released
July 28, 2016
Annotation (gkmsvm-model)
Submitter comment
The data has been revoked because the antibody used in this assay has been shown to be cross-reactive to CTCF in https://www.biorxiv.org/content/10.1101/2024.03.08.583864v1
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens GM12878 cell lineENCBS965YSGENCAB000AMRENCLB842ZPU
31Homo sapiens GM12878 cell lineENCBS594YOHENCAB000AMRENCLB901VQJ

Files

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Output type
Replicates

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