Experiment summary for ENCSR932ZMX

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens GM23338 originated from GM23248
Biosample Type
cell line
Replication type
isogenic
Description
Chip-Seq on PGP1 iPSC
Nucleic acid type
DNA
Fragmentation methods
see document
Strand specificity
Non-strand-specific

Attribution

ENCODE3 project
Lab
Richard Myers, HAIB
Award
U54HG006998 (Richard Myers, HAIB)
Project
ENCODE
External resources
Aliases
richard-myers:SL124780-SL124789
Date submitted
December 16, 2015
Date released
June 30, 2016
Related datasets
ENCSR769ZAH 
Reference epigenome for human GM23338 cell line
Submitter comment
This experiment is being used in the ENCODE-DREAM Transcription Factor Binding Site Prediction Challenge (https://www.synapse.org/#!Synapse:syn6131484/wiki/400026). The files will be unavailable until after the challenge completes on 09-30-16. UPDATE: There will be a second round to the challenge that is expected to end on 01-11-2017
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag DREAMSearch for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11GM23338 cell line originated from GM23248ENCBS368AAAENCAB247TYOENCLB429BWA
21GM23338 cell line originated from GM23248ENCBS373AAAENCAB247TYOENCLB869CAM