Experiment summary for ENCSR931WGT

doi:10.17989/ENCSR931WGT

Summary

Status
released
Assay
polyA plus RNA-seq
Biosample summary
Homo sapiens HepG2 cytosolic fraction
Biosample Type
cell line
Replication type
isogenic
Description
Initial cytosolic fractions on HepG2 Long Poly-A+ from Lecuyer
Nucleic acid type
polyadenylated mRNA
Size range
>200
Extraction method
Trizol
Fragmentation methods
chemical (Illumina TruSeq)
Size selection method
SPRI beads
Strand specificity
Strand-specific (reverse)
Spike-ins datasets
ENCSR422PLF

Attribution

ENCODE3 project
Lab
Eric Lécuyer, IRCM
Award
U54HG007005 (Brenton Graveley, UConn)
Project
ENCODE
External resources
Aliases
eric-lecuyer:HepG2-initPolyA-Cytosolic
Date submitted
February 1, 2016
Date released
April 21, 2016
Tags
Visit collection page for ENCORESearch for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens HepG2 cell line cytosolic fractionENCBS853NQWENCLB644EBX
21Homo sapiens HepG2 cell line cytosolic fractionENCBS955ZHFENCLB716GPJ