Experiment summary for ENCSR928FFW

Summary

Status
released
Assay
ChIP-seq
Biosample summary
Caenorhabditis elegans strain OP640 (unc-119(tm4063) III; wgIs640) whole organism early embryo using egg bleaching genetically modified using bombardment
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq of transgenic worms expressing TRA-4-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Fragmentation method
sonication (generic microtip)
Size selection method
SPRI
Strand specificity
Non-strand-specific
Controls

Attribution

modERN project
Lab
Valerie Reinke, Yale
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:TRA-4-OP640-EE
Date submitted
October 5, 2017
Date released
November 6, 2017

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsAntibodyLibrary
11strain OP640 (unc-119(tm4063) III; wgIs640) mixed sex early embryo using egg bleaching whole organism genetically modified (insertion) using bombardment targeting eGFP-tra-4ENCBS579VXHENCGM376RCIENCAB728YTOENCLB750DLN
21strain OP640 (unc-119(tm4063) III; wgIs640) mixed sex early embryo using egg bleaching whole organism genetically modified (insertion) using bombardment targeting eGFP-tra-4ENCBS852CUQENCGM376RCIENCAB728YTOENCLB781GGD