Experiment summary for ENCSR928API
doi:10.17989/ENCSR928API
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- RFX1
- Biosample summary
- Homo sapiens HepG2
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- RFX1 ChIP-seq on human HepG2
- Nucleic acid type
- DNA
- Size range
- 450-650
- Platform
- Illumina HiSeq 2000
- Controls
Attribution
ENCODE3 project
- Lab
- Michael Snyder, Stanford
- Award
- U54HG006996 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- michael-snyder:HepG2-RFX1_sc-10652
- Date submitted
- October 23, 2017
- Date released
- November 14, 2017
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Submitter comment
- IDR originally failed between replicates 1 and 2. Replicate 1 has been revoked and a new replicate 3 has been provided for a re-analysis
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens HepG2 cell line | ENCBS560TQP | ENCAB000BCV | ENCLB225KEC |
2 | 1 | Homo sapiens HepG2 cell line | ENCBS716YFX | ENCAB000BCV | ENCLB049ZHK |
3 | 1 | Homo sapiens HepG2 cell line | ENCBS803ZJJ | ENCAB000BCV | ENCLB909BWD |