Experiment summary for ENCSR919WAW

doi:10.17989/ENCSR919WAW

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CG11902
Biosample summary
Drosophila melanogaster strain CG11902-GFP whole organism prepupa genetically modified (insertion) using site-specific recombination targeting D. melanogaster CG11902
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing CG11902-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:CG11902-GFP
Date submitted
April 10, 2016
Date released
July 6, 2016
Submitter comment
ENCFF012PCR, ENCFF916MUK were revoked because a software bug accidentally truncated the file content. The submitters have provided replacement files.

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
21Drosophila melanogaster strain CG11902-GFP mixed sex prepupa whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster CG11902ENCBS166KQMENCGM361LRCENCAB728YTOENCLB856ALQ
31Drosophila melanogaster strain CG11902-GFP mixed sex prepupa whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster CG11902ENCBS546ERLENCGM361LRCENCAB728YTOENCLB886BNI
11Drosophila melanogaster strain CG11902-GFP mixed sex prepupa whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster CG11902ENCBS764RTIENCGM361LRCENCAB728YTOENCLB230QMK