Experiment summary for ENCSR919WAW

Summary

Status
released
Assay
ChIP-seq
Biosample summary
Drosophila melanogaster strain CG11902-GFP whole organism prepupa genetically modified using site-specific recombination
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing CG11902-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
200-800
Fragmentation method
sonication (Bioruptor generic)
Size selection method
SPRI
Strand specificity
Non-strand-specific
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:CG11902-GFP
Date submitted
April 10, 2016
Date released
July 6, 2016
Submitter comment
ENCFF012PCR, ENCFF916MUK were revoked because a software bug accidentally truncated the file content. The submitters have provided replacement files.

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsAntibodyLibrary
21strain CG11902-GFP mixed sex prepupa whole organism genetically modified (insertion) using site-specific recombination targeting eGFP-CG11902ENCBS166KQMENCGM361LRCENCAB728YTOENCLB856ALQ
31strain CG11902-GFP mixed sex prepupa whole organism genetically modified (insertion) using site-specific recombination targeting eGFP-CG11902ENCBS546ERLENCGM361LRCENCAB728YTOENCLB886BNI
11strain CG11902-GFP mixed sex prepupa whole organism genetically modified (insertion) using site-specific recombination targeting eGFP-CG11902ENCBS764RTIENCGM361LRCENCAB728YTOENCLB230QMK