Experiment summary for ENCSR909HKS
doi:10.17989/ENCSR909HKS
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- noc
- Biosample summary
- Drosophila melanogaster strain noc whole organism larva (48 days) genetically modified (insertion) using site-specific recombination targeting D. melanogaster noc
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- ChIP-seq on transgenic flies expressing -eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
- Nucleic acid type
- DNA
- Size range
- 200-800
- Fragmentation methods
- sonication (Bioruptor generic)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 4000
- Controls
Attribution
modERN project
- Lab
- Kevin White, UChicago
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:noc-GFP
- Date submitted
- April 12, 2019
- Date released
- May 23, 2019
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
---|---|---|---|---|---|---|
2 | 1 | Drosophila melanogaster strain noc mixed sex larva (48 days) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster noc | ENCBS350FWM | ENCGM099IFV | ENCAB728YTO | ENCLB374XSR |
3 | 1 | Drosophila melanogaster strain noc mixed sex larva (48 days) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster noc | ENCBS558IBR | ENCGM099IFV | ENCAB728YTO | ENCLB775RLV |
1 | 1 | Drosophila melanogaster strain noc mixed sex larva (48 days) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster noc | ENCBS418HSO | ENCGM099IFV | ENCAB728YTO | ENCLB469KRF |