1. Experiments
  2. RNA-seq
  3. Homo sapiens
  4. hepatocyte

Experiment summary for ENCSR908ZAS

doi:10.17989/ENCSR908ZAS

Summary

Status
released
Assay
RNA-seq (total RNA-seq)
Biosample summary
Homo sapiens hepatocyte originated from H9
Biosample Type
in vitro differentiated cells
Replication type
isogenic
Description
The libraries contained in this experiment come from stem cells that were differentiated down a hepatocytic pathway. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
Nucleic acid type
RNA
Depleted in
rRNA
Size range
>200
Fragmentation methods
see document
Strand specificity
Strand-specific (reverse)
Spike-ins datasets
ENCSR156CIL

Attribution

ENCODE3 project
Lab
Thomas Gingeras, CSHL
Award
U54HG007004 (Thomas Gingeras, CSHL)
Project
ENCODE
External resources
Date submitted
December 13, 2014
Date released
December 17, 2014
Reference Epigenome
ENCSR217ARS 
Tags
Visit collection page for SESCCSearch for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens female embryo (5 days) hepatocyte in vitro differentiated cells originated from H9ENCBS077RUJENCLB615ALX
21Homo sapiens female embryo (5 days) hepatocyte in vitro differentiated cells originated from H9ENCBS520VFVENCLB670RJP

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