Experiment summary for ENCSR894WMQ

doi:10.17989/ENCSR894WMQ

Summary

Status
released
Assay
RNA-seq (total RNA-seq)
Biosample summary
Homo sapiens myocyte originated from LHCN-M2
Biosample Type
in vitro differentiated cells
Replication type
isogenic
Description
The libraries contained in this experiment come from independent growths of immortalized cell line LHCN-M2 after 4 days of differentiation. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
Nucleic acid type
RNA
Depleted in
rRNA
Size range
>200
Fragmentation methods
see document
Strand specificity
Strand-specific (reverse)
Spike-ins datasets
ENCSR156CIL

Attribution

ENCODE3 project
Lab
Thomas Gingeras, CSHL
Award
U54HG007004 (Thomas Gingeras, CSHL)
Project
ENCODE
External resources
Date submitted
September 25, 2014
Date released
November 20, 2014
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
21Homo sapiens male adult (41 years) myocyte in vitro differentiated cells originated from LHCN-M2ENCBS231OMQENCLB561XGM
11Homo sapiens male adult (41 years) myocyte in vitro differentiated cells originated from LHCN-M2ENCBS234AAAENCLB534MTC