Experiment summary for ENCSR878RMZ

doi:10.17989/ENCSR878RMZ

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
HHEX
Biosample summary
Drosophila melanogaster strain CG7056-GFP whole organism embryo (0-24 hours) genetically modified (insertion) using site-specific recombination targeting D. melanogaster HHEX
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing CG7056-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
External resources
Aliases
kevin-white:CG7056-GFP
Date submitted
September 11, 2017
Date released
November 22, 2017

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
31Drosophila melanogaster strain CG7056-GFP mixed sex embryo (0-24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster HHEXENCBS567HMNENCGM190UXHENCAB728YTOENCLB418LQY
21Drosophila melanogaster strain CG7056-GFP mixed sex embryo (0-24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster HHEXENCBS502BRAENCGM190UXHENCAB728YTOENCLB776YNM
11Drosophila melanogaster strain CG7056-GFP mixed sex embryo (0-24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster HHEXENCBS422FQDENCGM190UXHENCAB728YTOENCLB341HZQ