Experiment summary for ENCSR870DRE
doi:10.17989/ENCSR870DRE
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Homo sapiens dendritic cell treated with lipopolysaccharide
- Biosample Type
- in vitro differentiated cells
- Replication type
- unreplicated
- Description
- Ovation Human FFPE RNA-Seq Multiplex System
- Treatments
- lipopolysaccharide (CHEBI:16412)
- Nucleic acid type
- RNA
- Size range
- 100-350
- Extraction method
- RNeasy Plus Mini Kit Qiagen cat#74134 plus additional on column Dnase treatment
- Strand specificity
- Strand-specific (forward)
- Platform
- Illumina HiSeq 2000
Attribution
Genomics of Gene Regulation Project
- Lab
- Manuel Garber, UMass
- Award
- U01HG007910 (Jeremy Luban, UMass)
- Project
- GGR
- External resources
- Aliases
- manuel-garber:D01_MDDC_Ctrl_0h_RNA-seq
- Date submitted
- February 6, 2016
- Date released
- January 19, 2017
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens dendritic in vitro differentiated cells treated with lipopolysaccharide | ENCBS026AWG | ENCLB503UPX |