Experiment summary for ENCSR862XXV
doi:10.17989/ENCSR862XXV
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Homo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens CTCF treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours
- Biosample Type
- cell line
- Replication type
- unreplicated
- Treatments
- 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours
- Nucleic acid type
- DNA
- Size range
- 200-600
- Platform
- Illumina NextSeq 500
Attribution
ENCODE4 project
- Lab
- Bradley Bernstein, Broad
- Award
- UM1HG009390 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- Aliases
- bradley-bernstein:Project Element 7422
- Date released
- July 21, 2022
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens HCT116 cell line genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, genetically modified (insertion) using CRISPR targeting H. sapiens CTCF treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours | ENCBS088IDX | ENCGM628IQH, ENCGM628AIR | ENCLB071WSH |
| 1 | 2 | Homo sapiens HCT116 cell line genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, genetically modified (insertion) using CRISPR targeting H. sapiens CTCF treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours | ENCBS088IDX | ENCGM628IQH, ENCGM628AIR | ENCLB707FXZ |