Experiment summary for ENCSR859HWB
doi:10.17989/ENCSR859HWB
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Biosample summary
- Homo sapiens hepatocyte originated from H9
- Biosample Type
- in vitro differentiated cells
- Replication type
- isogenic
- Description
- PolyA RNA-Seq from oligo-dT primed Total RNA on hepatocytes
- Nucleic acid type
- polyadenylated mRNA
- Library starting quantity
- 0.35ng
- Size range
- >200
- Extraction method
- Ambion mirVana
- Fragmentation methods
- chemical (Nextera tagmentation)
- Size selection method
- SPRI beads
- Strand specificity
- unstranded
- Spike-ins datasets
- ENCSR884LPM
- Platform
- Illumina HiSeq 2500
Attribution
ENCODE3 project
- Lab
- Barbara Wold, Caltech
- Award
- U54HG006998 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- References
- Date submitted
- April 19, 2016
- Date released
- May 3, 2016
- Reference Epigenome
- ENCSR217ARS
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
1 | 1 | Homo sapiens female embryo (5 days) hepatocyte in vitro differentiated cells originated from H9 | ENCBS520VFV | ENCLB881IUD |
2 | 1 | Homo sapiens female embryo (5 days) hepatocyte in vitro differentiated cells originated from H9 | ENCBS077RUJ | ENCLB816UYB |