Experiment summary for ENCSR853DWE
doi:10.17989/ENCSR853DWE
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CEBPB
- Biosample summary
- Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 7 hours
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- CEBPB ChIP-seq on A549 cell line treated with 100 nM dexamethasone for 7 hours.
- Treatments
- 100 nM dexamethasone (CHEBI:41879) for 7 hours
- Nucleic acid type
- DNA
- Library starting quantity
- 7ng
- Size range
- >200
- Fragmentation methods
- sonication (Bioruptor Twin)
- Size selection method
- dual SPRI
- Platform
- Illumina HiSeq 2000
- Controls
Attribution
Genomics of Gene Regulation Project
- Lab
- Tim Reddy, Duke
- Award
- U01HG007900 (Tim Reddy, Duke)
- Project
- GGR
- External resources
- Aliases
- tim-reddy:CEBPB.t7
- Date submitted
- October 19, 2016
- Date released
- October 27, 2016
- Treatment Time Series
- ENCSR625DZB
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens A549 cell line treated with 100 nM dexamethasone (agonist) for 7 hours | ENCBS317OMN | ENCAB681ZWH | ENCLB781BDZ |
2 | 1 | Homo sapiens A549 cell line treated with 100 nM dexamethasone (agonist) for 7 hours | ENCBS515PAZ | ENCAB681ZWH | ENCLB344PDO |
3 | 1 | Homo sapiens A549 cell line treated with 100 nM dexamethasone (agonist) for 7 hours | ENCBS016ESU | ENCAB681ZWH | ENCLB838SXO |