Experiment summary for ENCSR852KQC
doi:10.17989/ENCSR852KQC
Summary
- Status
- released
- Assay
- HiC (in situ Hi-C)
- Biosample summary
- Homo sapiens IMR-90
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- in-situ MboI IMR90 experiment
- Nucleic acid type
- DNA
- Library starting quantity
- 1200000cells [2-2]5000000cells [1-2]5000000cells [1-1]5000000cells [1-3]100000cells [3-1]100000cells [2-3]
- Size range
- 300-500
- Fragmentation methods
- chemical (MboI restriction)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 2500, Illumina HiSeq X Ten
Attribution
ENCODE4 project
- Lab
- Erez Aiden, Baylor
- Award
- UM1HG009375 (Erez Aiden, Baylor)
- Project
- ENCODE
- Aliases
- erez-aiden:HG-experiment-mboI-insitu-biorep
- Date submitted
- May 15, 2018
- Date released
- February 22, 2019
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
2 | 1 | Homo sapiens IMR-90 cell line | ENCBS361XFK | ENCLB825MAP |
2 | 2 | Homo sapiens IMR-90 cell line | ENCBS361XFK | ENCLB126OSS |
1 | 2 | Homo sapiens IMR-90 cell line | ENCBS532ZGJ | ENCLB512HIP |
1 | 5 | Homo sapiens IMR-90 cell line | ENCBS532ZGJ | ENCLB995LGB |
1 | 1 | Homo sapiens IMR-90 cell line | ENCBS532ZGJ | ENCLB476ZIC |
1 | 3 | Homo sapiens IMR-90 cell line | ENCBS532ZGJ | ENCLB647AML |
1 | 4 | Homo sapiens IMR-90 cell line | ENCBS532ZGJ | ENCLB880XHP |
3 | 1 | Homo sapiens IMR-90 cell line | ENCBS562LLK | ENCLB201RHE |
2 | 3 | Homo sapiens IMR-90 cell line | ENCBS361XFK | ENCLB068PBQ |