Experiment summary for ENCSR852KQC

doi:10.17989/ENCSR852KQC

Summary

Status
released
Assay
HiC (in situ Hi-C)
Biosample summary
Homo sapiens IMR-90
Biosample Type
cell line
Replication type
isogenic
Description
in-situ MboI IMR90 experiment
Nucleic acid type
DNA
Library starting quantity
1200000cells [2-2]5000000cells [1-2]5000000cells [1-1]5000000cells [1-3]100000cells [3-1]100000cells [2-3]
Size range
300-500
Fragmentation methods
chemical (MboI restriction)
Size selection method
SPRI beads

Attribution

ENCODE4 project
Lab
Erez Aiden, Baylor
Award
UM1HG009375 (Erez Aiden, Baylor)
Project
ENCODE
Aliases
erez-aiden:HG-experiment-mboI-insitu-biorep
Date submitted
May 15, 2018
Date released
February 22, 2019

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
21Homo sapiens IMR-90 cell lineENCBS361XFKENCLB825MAP
22Homo sapiens IMR-90 cell lineENCBS361XFKENCLB126OSS
12Homo sapiens IMR-90 cell lineENCBS532ZGJENCLB512HIP
15Homo sapiens IMR-90 cell lineENCBS532ZGJENCLB995LGB
11Homo sapiens IMR-90 cell lineENCBS532ZGJENCLB476ZIC
13Homo sapiens IMR-90 cell lineENCBS532ZGJENCLB647AML
14Homo sapiens IMR-90 cell lineENCBS532ZGJENCLB880XHP
31Homo sapiens IMR-90 cell lineENCBS562LLKENCLB201RHE
23Homo sapiens IMR-90 cell lineENCBS361XFKENCLB068PBQ