Experiment summary for ENCSR850IRM

doi:10.17989/ENCSR850IRM

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CG6765
Biosample summary
Drosophila melanogaster strain CG6765-GFP whole organism embryo (0-24 hours) genetically modified (insertion) using site-specific recombination targeting D. melanogaster CG6765
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing CG6765-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
External resources
Aliases
kevin-white:CG6765-GFP
Date submitted
December 21, 2016
Date released
January 10, 2017
Submitter comment
ENCFF063FIE, ENCFF231WBR, ENCFF251HCO, ENCFF165EZM were revoked because a software bug accidentally truncated the file content. The submitters will provide replacement files.

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
31Drosophila melanogaster strain CG6765-GFP mixed sex embryo (0-24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster CG6765ENCBS713VNUENCGM099XXLENCAB728YTOENCLB689KYX
21Drosophila melanogaster strain CG6765-GFP mixed sex embryo (0-24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster CG6765ENCBS563FGLENCGM099XXLENCAB728YTOENCLB563JQV
11Drosophila melanogaster strain CG6765-GFP mixed sex embryo (0-24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster CG6765ENCBS500ECAENCGM099XXLENCAB728YTOENCLB273TPE