1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. neuroepithelial stem cell

Experiment summary for ENCSR842NGQ

doi:10.17989/ENCSR842NGQ

Summary

Status
released
Assay
ChIP-seq (Histone ChIP-seq)
Target
H3K27ac
Biosample summary
Homo sapiens neuroepithelial stem cell stably expressing HES5 originated from H9
Biosample Type
in vitro differentiated cells
Replication type
isogenic
Nucleic acid type
DNA
Library starting quantity
1.87ng
Size range
200-600
Fragmentation methods
sonication (generic) [2-1]sonication (generic) [3-1]none [1-1]
Controls

Attribution

ENCODE3 project
Lab
Bradley Bernstein, Broad
Award
U54HG006991 (Bradley Bernstein, Broad)
Project
ENCODE
External resources
Aliases
bradley-bernstein:Project Element 976
Date submitted
March 1, 2016
Date released
May 20, 2016
Reference Epigenome
ENCSR978RSW 
Tags
Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
21Homo sapiens female embryo (5 days) neuroepithelial stem in vitro differentiated cells stably expressing C-terminal eGFP-tagged HES5 originated from H9ENCBS592DOFENCGM252BLFENCAB000AQNENCLB523UOL
31Homo sapiens female embryo (5 days) neuroepithelial stem in vitro differentiated cells stably expressing C-terminal eGFP-tagged HES5 originated from H9ENCBS709ZNPENCGM252BLFENCAB000AQNENCLB833JZM
11Homo sapiens female embryo (5 days) neuroepithelial stem in vitro differentiated cells stably expressing C-terminal eGFP-tagged HES5 originated from H9ENCBS562NPIENCGM252BLFENCAB000AQNENCLB588HPA

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