Experiment summary for ENCSR841TRV

doi:10.17989/ENCSR841TRV

Summary

Status
released
Assay
whole-genome shotgun bisulfite sequencing (WGBS)
Biosample summary
Mus musculus strain B6NTac;B6NCrl/Lap kidney tissue embryo (14.5 days)
Biosample Type
tissue
Replication type
isogenic
Description
Whole genome bisulfite-seq on embryonic 14.5 day mouse kidney
Nucleic acid type
DNA
Size range
180-500
Extraction method
QIAGEN DNeasy Blood & Tissue Kit
Fragmentation methods
shearing (Covaris S2)
Size selection method
Sera-mag SpeedBeads

Attribution

ENCODE3 project
Lab
Joe Ecker, Salk
Award
U54HG006997 (Bing Ren, UCSD)
Project
ENCODE
External resources
Aliases
joe-ecker:E14_5_KD
Date submitted
March 12, 2014
Date released
June 30, 2014
Organism Development Series
ENCSR790SUM 
Reference Epigenome
ENCSR840QVS 
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
21Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) kidney tissueENCBS569AAAENCLB754UHQ
11Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) kidney tissueENCBS565AAAENCLB807CDR
22Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) kidney tissueENCBS569AAAENCLB338HPX
12Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) kidney tissueENCBS565AAAENCLB648FFI