Experiment summary for ENCSR836MWK
Summary
- Status
- released
- Assay
- HiC (intact Hi-C)
- Biosample summary
- Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours
- Biosample Type
- primary cell
- Replication type
- unreplicated
- Description
- CD4 acticated intact Dnase HiC LP6
- Treatments
- anti-CD3 and anti-CD28 coated beads for 36 hours
- Nucleic acid type
- DNA
- Library starting quantity
- 1000000cells
- Size range
- 100-400
- Fragmentation methods
- chemical (DNaseI)
- Size selection method
- SPRI beads
- Platform
- Ultima Genomics
Attribution
ENCODE4 project
- Lab
- Erez Aiden, Baylor
- Award
- UM1HG009375 (Erez Aiden, Baylor)
- Project
- ENCODE
- Aliases
- erez-aiden:CD4-activated-dnase-intact-Dnase
- Date released
- August 22, 2024
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens male adult (20 years) activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 36 hours | ENCBS856QVV | ENCLB841TPR |
| 1 | 2 | Homo sapiens male adult (20 years) activated CD4-positive, alpha-beta T primary cell treated with anti-CD3 and anti-CD28 coated beads for 36 hours | ENCBS856QVV | ENCLB219VHD |