Experiment summary for ENCSR822EWO

doi:10.17989/ENCSR822EWO

Summary

Status
released
Assay
single-cell RNA sequencing assay (scRNA-seq)
Control type
control
Biosample summary
Mus musculus strain B6CASTF1/J cerebellar granule layer tissue male adult (14 months)
Biosample Type
tissue
Replication type
isogenic
Description
LCMD-503,504_Mm_Castaneus_x_C57Bl-granule-layer-area-dissection
Nucleic acid type
RNA
Library starting quantity
30cell-equivalent
Size range
>200
Lysis method
Clontech UltraLow for Illumina sequencing
Fragmentation methods
chemical (Nextera tagmentation)
Size selection method
SPRI beads
Strand specificity
unstranded
Spike-ins datasets
ENCSR013YHQ, ENCSR133ALU

Attribution

ENCODE3 project
Lab
Barbara Wold, Caltech
Award
U54HG006998 (Richard Myers, HAIB)
Project
ENCODE
External resources
Date submitted
June 26, 2015
Date released
October 13, 2015
Organism Development Series
ENCSR097PJJ 

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
21Mus musculus strain B6CASTF1/J male adult (14 months) cerebellar granule layer tissueENCBS616ZXCENCLB646JVH
11Mus musculus strain B6CASTF1/J male adult (14 months) cerebellar granule layer tissueENCBS497KQRENCLB021ACJ