Experiment summary for ENCSR815VVI

Summary

Status
released
Assay
eCLIP
Target
CDC40
Biosample summary
Homo sapiens HepG2
Biosample Type
cell line
Replication type
isogenic
Description
eCLIP experiment on HepG2 against CDC40
Nucleic acid type
RNA
Size range
175-300
Lysis method
see document
Extraction method
see document
Fragmentation methods
see document
Size selection method
agarose gel extraction
Strand specificity
Strand-specific
Controls

Attribution

ENCODE3 project
Lab
Gene Yeo, UCSD
Award
U54HG007005 (Brenton Graveley, UConn)
Project
ENCODE
External resources
Aliases
gene-yeo:556
Date submitted
March 15, 2016
Date released
October 31, 2016
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag ENCORE

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
21HepG2 cell lineENCBS492SDYENCAB127ICLENCLB514ZXV
11HepG2 cell lineENCBS881CIFENCAB127ICLENCLB148JZM