Experiment summary for ENCSR814JMM

doi:10.17989/ENCSR814JMM

Summary

Status
released
Assay
single-cell RNA sequencing assay (scRNA-seq)
Control type
control
Biosample summary
Mus musculus strain B6NCrl cerebellar granule layer tissue male adult (8 months)
Biosample Type
tissue
Replication type
isogenic
Description
RNA-seq on a dissected area of granule cells from an 8 month old male wild type C57Bl6 mouse
Nucleic acid type
RNA
Library starting quantity
50cells
Size range
>200
Fragmentation methods
chemical (Nextera tagmentation)
Size selection method
SPRI beads
Strand specificity
unstranded
Spike-ins datasets
ENCSR013YHQ, ENCSR133ALU

Attribution

ENCODE3 project
Lab
Barbara Wold, Caltech
Award
U54HG006998 (Richard Myers, HAIB)
Project
ENCODE
External resources
Date submitted
December 16, 2014
Date released
December 17, 2014
Organism Development Series
ENCSR768KSC 

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Mus musculus strain B6NCrl male adult (8 months) cerebellar granule layer tissueENCBS483PMBENCLB521CXU
21Mus musculus strain B6NCrl male adult (8 months) cerebellar granule layer tissueENCBS569SMFENCLB969JPS