Experiment summary for ENCSR809IFM

doi:10.17989/ENCSR809IFM

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
repo-1
Biosample summary
Caenorhabditis elegans strain OP688 (unc-119(tm4063) III; wgIs688) whole organism young adult 53 hours post synchronization at L1 larva starved after bleaching stage genetically modified (insertion) using bombardment targeting C. elegans repo-1
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq of transgenic worms expressing REPO-1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Fragmentation methods
sonication (generic microtip)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Valerie Reinke, Yale
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
External resources
Aliases
kevin-white:REPO-1-OP688-yAd
Date submitted
October 5, 2017
Date released
November 6, 2017

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
21Caenorhabditis elegans strain OP688 (unc-119(tm4063) III; wgIs688) mixed sex young adult 53 hours post synchronization at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans repo-1ENCBS587OLIENCGM246XOFENCAB728YTOENCLB456OPN
11Caenorhabditis elegans strain OP688 (unc-119(tm4063) III; wgIs688) mixed sex young adult 53 hours post synchronization at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans repo-1ENCBS519NPFENCGM246XOFENCAB728YTOENCLB530VAI