Experiment summary for ENCSR806JUF

Summary

Status
released
Assay
ChIP-seq
Biosample summary
Caenorhabditis elegans strain OP642 (unc-119 (tm4063) III; wgIs642) whole organism early embryo 0 hours post synchronization using egg bleaching genetically modified using bombardment
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq of transgenic worms expressing B0310.2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Fragmentation method
sonication (generic microtip)
Size selection method
SPRI
Strand specificity
Non-strand-specific
Controls

Attribution

modERN project
Lab
Valerie Reinke, Yale
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:B0310.2-OP642-EE
Date submitted
October 4, 2016
Date released
October 10, 2016
Submitter comment
ENCFF054USF, ENCFF986RVJ, ENCFF858TYG, ENCFF538TGZ were revoked because a software bug accidentally truncated the file content. The submitters will provide replacement files.

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsAntibodyLibrary
21strain OP642 (unc-119 (tm4063) III; wgIs642) mixed sex early embryo 0 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting eGFP-B0310.2ENCBS760ECQENCGM246FWMENCAB728YTOENCLB712JUA
11strain OP642 (unc-119 (tm4063) III; wgIs642) mixed sex early embryo 0 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting eGFP-B0310.2ENCBS434FBUENCGM246FWMENCAB728YTOENCLB119EOG