Experiment summary for ENCSR803ICQ

doi:10.17989/ENCSR803ICQ

Summary

Status
released
Assay
whole-genome shotgun bisulfite sequencing (WGBS)
Biosample summary
Mus musculus strain B6NCrl midbrain tissue embryo (10.5 days)
Biosample Type
tissue
Replication type
isogenic
Description
Whole genome bisulfite-seq on embryonic 10.5 day mouse midbrain
Nucleic acid type
DNA
Size range
180-500
Lysis method
QIAGEN DNeasy Blood & Tissue Kit
Fragmentation methods
shearing (Covaris S2)
Size selection method
Sera-mag SpeedBeads

Attribution

ENCODE3 project
Lab
Joe Ecker, Salk
Award
U54HG006997 (Bing Ren, UCSD)
Project
ENCODE
External resources
Aliases
joe-ecker:E10_5_MB
Date submitted
October 17, 2016
Date released
October 28, 2016
Reference Epigenome
ENCSR893YWL 
Organism Development Series
ENCSR727TBB 
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Mus musculus strain B6NCrl mixed sex embryo (10.5 days) midbrain tissueENCBS491CAXENCLB569KIZ
22Mus musculus strain B6NCrl mixed sex embryo (10.5 days) midbrain tissueENCBS613YYLENCLB868LIT
12Mus musculus strain B6NCrl mixed sex embryo (10.5 days) midbrain tissueENCBS491CAXENCLB380OJS
21Mus musculus strain B6NCrl mixed sex embryo (10.5 days) midbrain tissueENCBS613YYLENCLB540HFM