Experiment summary for ENCSR800UAU

doi:10.17989/ENCSR800UAU

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
D1
Biosample summary
Drosophila melanogaster strain D1 whole organism pupa (24 hours) genetically modified (insertion) using site-specific recombination targeting D. melanogaster D1
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing -eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
External resources
Aliases
kevin-white:D1-GFP
Date submitted
September 18, 2018
Date released
September 26, 2018

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
11Drosophila melanogaster strain D1 pupa (24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster D1ENCBS025TEXENCGM177VEHENCAB728YTOENCLB966LNP
21Drosophila melanogaster strain D1 pupa (24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster D1ENCBS489BHZENCGM177VEHENCAB728YTOENCLB053EEK