Experiment summary for ENCSR794HZG
doi:10.17989/ENCSR794HZG
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- HmgZ
- Biosample summary
- Drosophila melanogaster strain HmgZ whole organism embryo (4-24 hours) genetically modified (insertion) using site-specific recombination targeting D. melanogaster HmgZ
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- Input control for ChIP-seq on transgenic flies expressing HmgZ-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Size range
- 200-800
- Fragmentation methods
- sonication (Bioruptor generic)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 4000
- Controls
Attribution
modERN project
- Lab
- Kevin White, UChicago
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:HmgZ-GFP
- Date submitted
- May 29, 2018
- Date released
- June 12, 2018
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 3 | 1 | Drosophila melanogaster strain HmgZ mixed sex embryo (4-24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster HmgZ | ENCBS322NVE | ENCGM387FEA | ENCAB728YTO | ENCLB310XCD |
| 1 | 1 | Drosophila melanogaster strain HmgZ mixed sex embryo (4-24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster HmgZ | ENCBS324UGN | ENCGM387FEA | ENCAB728YTO | ENCLB349PVQ |