Experiment summary for ENCSR784VGW
doi:10.17989/ENCSR784VGW
Summary
- Status
- released
- Assay
- whole-genome shotgun bisulfite sequencing (WGBS)
- Biosample summary
- Mus musculus strain B6NCrl large intestine tissue adult (2 months)
- Biosample Type
- tissue
- Replication type
- isogenic
- Description
- Whole genome bisulfite-seq on 8 week adult mouse large intestine
- Nucleic acid type
- DNA
- Size range
- 180-500
- Lysis method
- QIAGEN DNeasy Blood & Tissue Kit
- Fragmentation methods
- shearing (Covaris S2)
- Size selection method
- Sera-mag SpeedBeads
- Platform
- Illumina HiSeq 2500
Attribution
ENCODE3 project
- Lab
- Joe Ecker, Salk
- Award
- U54HG006997 (Bing Ren, UCSD)
- Project
- ENCODE
- External resources
- Aliases
- joe-ecker:P8w_LB
- Date submitted
- March 14, 2018
- Date released
- March 30, 2018
- Organism Development Series
- ENCSR765AWJ
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Mus musculus strain B6NCrl mixed sex adult (2 months) large intestine tissue | ENCBS118OIK | ENCLB899MHU |
| 1 | 2 | Mus musculus strain B6NCrl mixed sex adult (2 months) large intestine tissue | ENCBS118OIK | ENCLB848OOV |
| 2 | 1 | Mus musculus strain B6NCrl mixed sex adult (2 months) large intestine tissue | ENCBS254UEN | ENCLB865DZQ |
| 2 | 2 | Mus musculus strain B6NCrl mixed sex adult (2 months) large intestine tissue | ENCBS254UEN | ENCLB397CLV |