Experiment summary for ENCSR761AQZ

Summary

Status
released
Assay
CRISPRi followed by RNA-seq (CRISPRi RNA-seq)
Biosample summary
Homo sapiens K562 genetically modified using CRISPR
Biosample Type
cell line
Replication type
isogenic
Description
RNA-seq on K562 cells treated by CRISPR interference for a non-specific target (batch D control).
Nucleic acid type
RNA
Size range
>200
Strand specificity
Non-strand-specific

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
Aliases
michael-snyder:E-K562-CRISPRi-Ctrl-tx-D
Date submitted
March 28, 2017
Date released
November 18, 2017

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsLibrary
11K562 cell line genetically modified (interference) using CRISPR targeting Non-specific target controlENCBS301LXHENCGM404HDCENCLB934HEE
21K562 cell line genetically modified (interference) using CRISPR targeting Non-specific target controlENCBS347KXGENCGM404HDCENCLB709IGQ