Experiment summary for ENCSR754VAJ
doi:10.17989/ENCSR754VAJ
Summary
- Status
- released
- Assay
- ChIP-seq (Histone ChIP-seq)
- Target
- H3K27me3
- Biosample summary
- Homo sapiens H9 stably expressing HES5
- Biosample Type
- cell line
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Library starting quantity
- 22.7ng
- Size range
- 300-1000 [1-1]200-600 [2-1]
- Fragmentation methods
- none [1-1]sonication (generic) [2-1]
- Platform
- Illumina HiSeq 2000, Illumina HiSeq 2500
- Controls
Attribution
ENCODE3 project
- Lab
- Bradley Bernstein, Broad
- Award
- U54HG006991 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- Aliases
- bradley-bernstein:Project Element 973
- Date submitted
- October 3, 2015
- Date released
- May 20, 2016
- Reference Epigenome
- ENCSR323FKB
- Submitter comment
- One replicate has only 5 million reads. It is difficult to find correlation when one replicate is shallow and one is deep>
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens H9 cell line stably expressing C-terminal eGFP-tagged HES5 | ENCBS703ZDS | ENCGM252BLF | ENCAB000BLA | ENCLB533UET |
| 2 | 1 | Homo sapiens H9 cell line stably expressing C-terminal eGFP-tagged HES5 | ENCBS769EPD | ENCGM252BLF | ENCAB643NJW | ENCLB305TVL |