Experiment summary for ENCSR749COU

Summary

Status
released
Assay
whole-genome shotgun bisulfite sequencing (WGBS)
Biosample summary
Mus musculus C57BL/6 kidney adult (54-61 day)
Biosample Type
tissue
Replication type
isogenic
Description
Whole genome bisulfite-seq on 8 week adult mouse kidney
Nucleic acid type
DNA
Size range
180-500
Lysis method
Qaigen Kit DnEasy Blood and Tissue 69504
Fragmentation method
shearing (Covaris S2)
Size selection method
Sera-mag SpeedBeads
Strand specificity
Non-strand-specific

Attribution

ENCODE3 project
Lab
Joe Ecker, Salk
Award
U54HG006997 (Bing Ren, UCSD)
Project
ENCODE
Aliases
joe-ecker:P8w_KD
Date submitted
March 14, 2018
Date released
March 30, 2018

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleLibrary
22strain B6NCrl mixed sex adult (54-61 day) kidney tissueENCBS754XTZENCLB831TCW
12strain B6NCrl mixed sex adult (54-61 day) kidney tissueENCBS492BCRENCLB310OUE
21strain B6NCrl mixed sex adult (54-61 day) kidney tissueENCBS754XTZENCLB749SVZ
11strain B6NCrl mixed sex adult (54-61 day) kidney tissueENCBS492BCRENCLB816IMB