Experiment summary for ENCSR748LQF
doi:10.17989/ENCSR748LQF
Summary
- Status
- released
- Assay
- HiC (in situ Hi-C)
- Biosample summary
- Homo sapiens THP-1
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- in situ MboI Hi-C
- Nucleic acid type
- DNA
- Library starting quantity
- 6000000cells
- Size range
- 300-500
- Fragmentation methods
- chemical (MboI restriction)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE3 project
- Lab
- Michael Snyder, Stanford
- Award
- U54HG006996 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- michael-snyder:THP-1_cells_untreated
- Date submitted
- October 5, 2017
- Date released
- October 25, 2018
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens THP-1 cell line | ENCBS615XLU | ENCLB417VRG |
| 1 | 2 | Homo sapiens THP-1 cell line | ENCBS615XLU | ENCLB076DGG |
| 1 | 3 | Homo sapiens THP-1 cell line | ENCBS615XLU | ENCLB546KKI |
| 2 | 1 | Homo sapiens THP-1 cell line | ENCBS913QYS | ENCLB919ZNJ |
| 2 | 2 | Homo sapiens THP-1 cell line | ENCBS913QYS | ENCLB479SZL |
| 2 | 3 | Homo sapiens THP-1 cell line | ENCBS913QYS | ENCLB024DQM |