Experiment summary for ENCSR744BON

Summary

Status
released
Assay
ChIP-seq
Biosample summary
Caenorhabditis elegans strain OP109 (unc-119(ed3) III; wgIs109) whole organism hermaphrodite L2 larva genetically modified using bombardment
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq of transgenic worms expressing BLMP-1-eGFP fusion proteins.
Nucleic acid type
DNA
Fragmentation method
sonication (generic microtip)
Size selection method
eGEL
Strand specificity
Non-strand-specific
Controls

Attribution

modERN project
Lab
Valerie Reinke, Yale
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:BLMP-1-OP109-L2
Date submitted
July 30, 2015
Date released
November 22, 2017
Submitter comment
This experiment was completed during modENCODE and has lower read depth than the current modERN standard.

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsAntibodyLibrary
31strain OP109 (unc-119(ed3) III; wgIs109) hermaphrodite L2 larva whole organism genetically modified (insertion) using bombardment targeting eGFP-blmp-1ENCBS839FGMENCGM432XNAENCAB435FBQENCLB430IFC
21strain OP109 (unc-119(ed3) III; wgIs109) hermaphrodite L2 larva whole organism genetically modified (insertion) using bombardment targeting eGFP-blmp-1ENCBS762OGEENCGM432XNAENCAB435FBQENCLB436OVN