Experiment summary for ENCSR741KZZ

doi:10.17989/ENCSR741KZZ

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
ftz-f1
Biosample summary
Drosophila melanogaster strain ftz-f1-GFP whole organism embryo (0-24 hours) genetically modified (insertion) using site-specific recombination targeting D. melanogaster ftz-f1
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing ftz-f1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
External resources
Aliases
kevin-white:ftz-f1-GFP
Date submitted
October 22, 2015
Date released
July 6, 2016
Submitter comment
ENCFF241RWR, ENCFF874ZDK, ENCFF378PGS, ENCFF250UKA were revoked because a software bug accidentally truncated the file content. The submitters will provide replacement files.

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
41Drosophila melanogaster strain ftz-f1-GFP mixed sex embryo (0-24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster ftz-f1ENCBS241YWPENCGM175GBRENCAB728YTOENCLB917LEH
11Drosophila melanogaster strain ftz-f1-GFP mixed sex embryo (0-24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster ftz-f1ENCBS313WADENCGM175GBRENCAB728YTOENCLB141LHR