Experiment summary for ENCSR719NAJ

doi:10.17989/ENCSR719NAJ

Summary

Status
released
Assay
polyA plus RNA-seq
Biosample summary
Mus musculus strain B6NCrl midbrain tissue postnatal (0 days)
Biosample Type
tissue
Replication type
isogenic
Description
PolyA RNA-Seq from oligo-dT primed Total RNA on postnatal 0 day mouse midbrain
Nucleic acid type
polyadenylated mRNA
RNA integrity number
9.6
Library starting quantity
10ng
Size range
>200
Extraction method
Ambion mirVana
Fragmentation methods
chemical (Nextera tagmentation)
Size selection method
SPRI beads
Strand specificity
unstranded
Spike-ins datasets
ENCSR013YHQ, ENCSR133ALU

Attribution

ENCODE3 project
Lab
Barbara Wold, Caltech
Award
U54HG006998 (Richard Myers, HAIB)
Project
ENCODE
External resources
Date submitted
March 27, 2015
Date released
June 23, 2015
Organism Development Series
ENCSR505AHT 
Reference Epigenome
ENCSR022KAT 
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Mus musculus strain B6NCrl postnatal (0 days) midbrain tissueENCBS169PZDENCLB080NNG
21Mus musculus strain B6NCrl postnatal (0 days) midbrain tissueENCBS960FNVENCLB180OTB