Experiment summary for ENCSR718SDE

Summary

Status
released
Assay
ChIP-seq
Target
RLF
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
RLF ChIP-seq on human K562
Nucleic acid type
DNA
Size range
450-650
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
Aliases
michael-snyder:ChIPss-748
Date submitted
February 28, 2017
Date released
January 26, 2018
Submitter comment
We note that this ChIP-seq experiment was performed using an antibody for which we have provided a compliant primary characterization but no secondary characterization. A secondary characterization using IP-MS was attempted, but the experiment failed. There is no remaining antibody from this lot number and therefore additional secondary characterizations cannot be attempted. However, because the replicate ChIP-seq datasets passed the ENCODE IDR ChIP-seq data quality standards, we are releasing the data to the public.

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
21K562 cell lineENCBS118YJZENCAB069FYQENCLB278GNJ
31K562 cell lineENCBS734NZLENCAB069FYQENCLB430LRT