Experiment summary for ENCSR700QBR
doi:10.17989/ENCSR700QBR
Summary
- Status
- released
- Assay
- ATAC-seq
- Biosample summary
- Mus musculus strain B6NTac;B6NCrl/Lap neural tube tissue embryo (14.5 days)
- Biosample Type
- tissue
- Replication type
- isogenic
- Description
- ATAC-seq on embryonic e14.5 mouse neural tube
- Nucleic acid type
- DNA
- Size range
- 200-750
- Lysis method
- ATAC buffer
- Fragmentation methods
- chemical (Nextera tagmentation)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 4000
Attribution
ENCODE3 project
- Lab
- Bing Ren, UCSD
- Award
- U54HG006997 (Bing Ren, UCSD)
- Project
- ENCODE
- External resources
- Aliases
- bing-ren:e14.5_neural_tube_ATAC-seq
- Date submitted
- March 14, 2017
- Date released
- October 10, 2017
- Reference Epigenome
- ENCSR295OVP
- Organism Development Series
- ENCSR868EZR
- Annotation (gkmsvm-model)
- Annotation (ChromBPNet-model)
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) neural tube tissue | ENCBS037AAA | ENCLB606GVG |
| 2 | 1 | Mus musculus strain B6NTac;B6NCrl/Lap mixed sex embryo (14.5 days) neural tube tissue | ENCBS025AAA | ENCLB772YWR |