Experiment summary for ENCSR698UZG

Summary

Status
released
Assay
ChIP-seq
Biosample summary
Drosophila melanogaster VK00033 whole organism embryo (0-16 hours) genetically modified using site-specific recombination
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing Esplmgamma-HLH-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
200-800
Fragmentation method
sonication (Bioruptor generic)
Size selection method
SPRI
Strand specificity
Non-strand-specific
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:Esplmgamma-HLH-GFP
Date submitted
August 3, 2016
Date released
September 29, 2016
Submitter comment
ENCFF345SGB, ENCFF406UHR, ENCFF730UKW, ENCFF091ZGG were revoked because a software bug accidentally truncated the file content. The submitters will provide replacement files.

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsAntibodyLibrary
31strain Esplmgamma-HLH-GFP mixed sex embryo (0-16 hours) whole organism genetically modified (insertion) using site-specific recombination targeting eGFP-E(spl)mγ-HLHENCBS825MIKENCGM425UELENCAB728YTOENCLB988WHR
21strain Esplmgamma-HLH-GFP mixed sex embryo (0-16 hours) whole organism genetically modified (insertion) using site-specific recombination targeting eGFP-E(spl)mγ-HLHENCBS378APGENCGM425UELENCAB728YTOENCLB435IKY
11strain Esplmgamma-HLH-GFP mixed sex embryo (0-16 hours) whole organism genetically modified (insertion) using site-specific recombination targeting eGFP-E(spl)mγ-HLHENCBS096ZBKENCGM425UELENCAB728YTOENCLB290MBN