Experiment summary for ENCSR698RXJ

Summary

Status
released
Assay
ChIP-seq
Biosample summary
Caenorhabditis elegans strain OP385 (unc-119(tm4063) III; wgIs385) whole organism hermaphrodite young adult 65 hours post synchronization at L1 larva starved after bleaching stage genetically modified using bombardment
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq of transgenic worms expressing F55B11.4-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Fragmentation method
sonication (generic microtip)
Size selection method
SPRI
Strand specificity
Non-strand-specific
Controls

Attribution

modERN project
Lab
Valerie Reinke, Yale
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:F55B11.4-OP385-yAd
Date submitted
August 24, 2015
Date released
July 6, 2016
Submitter comment
ENCFF284QUR, ENCFF196HRQ were revoked because a software bug accidentally truncated the file content. The submitters will provide replacement files.

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsAntibodyLibrary
11strain OP385 (unc-119(tm4063) III; wgIs385) hermaphrodite young adult 65 hours post synchronization at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting eGFP-F55B11.4ENCBS560ZMEENCGM235LDPENCAB728YTOENCLB273JWK
21strain OP385 (unc-119(tm4063) III; wgIs385) hermaphrodite young adult 65 hours post synchronization at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting eGFP-F55B11.4ENCBS314GUZENCGM235LDPENCAB728YTOENCLB813WMH