Experiment summary for ENCSR682YQM
doi:10.17989/ENCSR682YQM
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- pros
- Biosample summary
- Drosophila melanogaster strain pros-GFP whole organism embryo (2-18 hours) genetically modified (insertion) using site-specific recombination targeting D. melanogaster pros
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- ChIP-seq on transgenic flies expressing -eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
- Nucleic acid type
- DNA
- Size range
- 200-800
- Fragmentation methods
- sonication (Bioruptor generic)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 4000
- Controls
Attribution
modERN project
- Lab
- Kevin White, UChicago
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:pros-GFP
- Date submitted
- April 12, 2019
- Date released
- May 16, 2019
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
---|---|---|---|---|---|---|
3 | 1 | Drosophila melanogaster strain pros-GFP mixed sex embryo (2-18 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster pros | ENCBS895ZHH | ENCGM302QWO | ENCAB728YTO | ENCLB540GRR |
1 | 1 | Drosophila melanogaster strain pros-GFP mixed sex embryo (2-18 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster pros | ENCBS618FSS | ENCGM302QWO | ENCAB728YTO | ENCLB907TFZ |
2 | 1 | Drosophila melanogaster strain pros-GFP mixed sex embryo (2-18 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster pros | ENCBS611STO | ENCGM302QWO | ENCAB728YTO | ENCLB757RHC |