Experiment summary for ENCSR673WZL

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens LNCAP treated with 10 nM 17β-hydroxy-5α-androstan-3-one for 4 hours
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq on human LNCAP
Treatments
10 nM 17β-hydroxy-5α-androstan-3-one (CHEBI:16330) for 4 hours
Nucleic acid type
DNA
Size range
450-650
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:ChIPss-754
Date submitted
July 14, 2017
Date released
June 29, 2017
Submitter comment
ENCFF091MJA and ENCFF279RQR were revoked because the flowcell was found to be bad. ENCFF616TAT, ENCFF425NMS, ENCFF677OAS and ENCFF717IEJ are their replacements. The original processed files were revoked and will be re-processed with the replacement data.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag ccre_inputv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11LNCAP cell line treated with 10 nM 17β-hydroxy-5α-androstan-3-one for 4 hoursENCBS260TROENCAB498PCMENCLB039OJJ
21LNCAP cell line treated with 10 nM 17β-hydroxy-5α-androstan-3-one for 4 hoursENCBS421PUJENCAB498PCMENCLB380GDQ