Experiment summary for ENCSR673OGC

doi:10.17989/ENCSR673OGC

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
BCL3
Biosample summary
Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 10 hours
Biosample Type
cell line
Replication type
isogenic
Description
BCL3 ChIP-seq on A549 cell line treated with 100 nM dexamethasone for 10 hours.
Treatments
100 nM dexamethasone (CHEBI:41879) for 10 hours
Nucleic acid type
DNA
Library starting quantity
7ng
Size range
>200
Fragmentation methods
sonication (Bioruptor Twin)
Size selection method
dual SPRI
Controls

Attribution

Genomics of Gene Regulation Project
Lab
Tim Reddy, Duke
Award
U01HG007900 (Tim Reddy, Duke)
Project
GGR
External resources
Aliases
tim-reddy:BCL3.t10
Date submitted
October 19, 2016
Date released
October 27, 2016
Treatment Time Series
ENCSR022IHB 
Annotation (gkmsvm-model)
Tags
Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag RegulomeDB_2_1

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens A549 cell line treated with 100 nM dexamethasone (agonist) for 10 hoursENCBS238ZNPENCAB365DEFENCLB015YHV
21Homo sapiens A549 cell line treated with 100 nM dexamethasone (agonist) for 10 hoursENCBS308VXKENCAB365DEFENCLB476KBJ