Experiment summary for ENCSR672YNE
doi:10.17989/ENCSR672YNE
Summary
- Status
- released
- Assay
- single-nucleus ATAC-seq (snATAC-seq)
- Biosample summary
- Mus musculus strain B6CASTF1/J layer of hippocampus tissue nuclear fraction female adult (2 months)
- Biosample Type
- tissue
- Replication type
- unreplicated
- Nucleic acid type
- DNA
- Size range
- 200-7000
- Fragmentation methods
- chemical (Tn5 transposase)
- Library construction platform
- 10X Genomics Chromium Controller
- Platform
- Illumina NovaSeq 6000
Attribution
ENCODE4 project
- Lab
- Michael Snyder, Stanford
- Award
- UM1HG009442 (Michael Snyder, Stanford)
- Project
- ENCODE
- Aliases
- michael-snyder:pAS-627, michael-snyder:pAS-Encode B6CastF1--2 months female 4-6 pooled Hippocampus scATAC
- Date released
- March 16, 2022
- Multiomics Series
- ENCSR765ROV
- Organism Development Series
- ENCSR395SII
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Mus musculus strain B6CASTF1/J female adult (2 months) layer of hippocampus tissue, preserved by flash-freezing nuclear fraction | ENCBS841ZQP | ENCLB842AYU |