Experiment summary for ENCSR667JTA

Summary

Status
revoked
Assay
RNA-seq (total RNA-seq)
Biosample summary
Homo sapiens MCF-7
Biosample Type
cell line
Replication type
isogenic
Description
RNA Evaluation MCF7 Long Total from Graveley
Nucleic acid type
RNA
RNA integrity number
9.2 [1-1]9.1 [2-1]
Depleted in
rRNA
Size range
>200
Extraction method
Trizol
Fragmentation methods
chemical (Illumina TruSeq)
Size selection method
SPRI beads
Strand specificity
Strand-specific
Spike-ins datasets
ENCSR449DXG

Attribution

ENCODE3 project
Lab
Brenton Graveley, UConn
Award
U54HG007005 (Brenton Graveley, UConn)
Project
ENCODE
External resources
Aliases
brenton-graveley:MCF7
Date submitted
June 17, 2014
Date released
June 30, 2014
Tags
Visit collection page for ENCORESearch for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens MCF-7 cell lineENCBS328UKJENCLB240JZT
21Homo sapiens MCF-7 cell lineENCBS174OTKENCLB188STW